Integrated post-GWAS, single-cell, and functional analyses prioritize TCTN2 at an osteoarthritis locus associated with innate immunity-related cartilage remodeling - Report - MDSpire
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Comprehensive Integration of Post-GWAS, Single-Cell Insights, and Functional Studies Highlights TCTN2 at an Osteoarthritis Locus Linked to Innate Immune Cartilage Remodeling
Clinical Report: TCTN2 at an Osteoarthritis Locus Linked to Immune Remodeling
Overview
This study integrates post-GWAS insights with single-cell data to prioritize TCTN2 as a candidate gene within an osteoarthritis susceptibility locus.
Background
Osteoarthritis (OA) is a prevalent joint disease characterized by cartilage degeneration and inflammation. Understanding the genetic underpinnings of OA is crucial for identifying potential therapeutic targets. Recent advancements in genome-wide association studies (GWAS) and single-cell biology have provided new insights into the complex mechanisms underlying OA.
Data Highlights
Variant
Prioritization Score
rs11611450
0.999853
TCTN2 abundance in OA vs normal cartilage
delta = 0.45, P = 2.8 × 10-2
Fibroblast eMAGMA support for TCTN2
P = 8.34 × 10-10
Hypertrophic markers increase upon Tctn2 knockdown