Transcriptomic differences in chromatin and cell cycle regulation in A549 cells after irradiation with carbon ions and X-rays - Report - MDSpire

Transcriptomic differences in chromatin and cell cycle regulation in A549 cells after irradiation with carbon ions and X-rays

  • By

  • Hasan Nisar

  • Özdemirhan Serçin

  • Christine E. Hellweg

  • July 14, 2026

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Differential Transcriptomic Responses in A549 Cells Following Irradiation

Overview

This study investigates the distinct transcriptional responses of A549 lung cancer cells to carbon ion and X-ray irradiation. Findings reveal that carbon ion exposure leads to unique downregulation of mitotic regulators and enrichment of stress-associated pathways compared to X-ray exposure.

Background

Lung cancer is a leading cause of cancer mortality, and radiotherapy is crucial in treatment strategies. Understanding the differential effects of high-linear energy transfer (LET) radiation, such as carbon ions, compared to low-LET X-rays is essential for improving therapeutic outcomes and minimizing damage to normal tissues.

Data Highlights

No numerical data provided in the source material.

Key Findings

  • Both carbon ions and X-rays activated a conserved DNA damage response involving p53 signaling.
  • Carbon ions selectively suppressed mitotic regulators such as CENPE, KIF2C, PLK1, and BUB1.
  • High-LET irradiation enriched inflammatory and stress-associated pathways, including TNF and NF-κB.
  • Carbon ions downregulated core and linker histone genes, indicating chromatin regulatory changes.
  • KRAS-associated gene networks were enriched under high-LET conditions, reflecting stress-responsive signaling convergence.

Clinical Implications

Understanding the differential transcriptional responses to carbon ion irradiation may provide insights into the underlying mechanisms of radiotherapy.

Conclusion

The study highlights the unique transcriptional landscape induced by carbon ion irradiation.

Related Resources & Content

  1. Archives of Toxicology, 2015 -- Evaluation of Gene Expression Changes Associated with Genomic Stability and Interactions Induced by Cadmium Using High-Throughput RT-qPCR
  2. Basic Research in Cardiology, 2013 -- Ionizing Radiation Influences Cardiac Calcium Management Through Enhanced ROS Production and CaMKII Activation
  3. Archives of Toxicology, 2021 -- Reevaluating Calmodulin's Role in Calcium and ROS Regulation Following Exposure to Carbon Black Nanoparticles
  4. Archives of Toxicology, 2018 -- Impairment of Function in Intestinal Cells Induced by Altertoxin II (ATXII) In Vitro: Interaction of Cytotoxicity and Mechanotransduction
  5. Early and locally advanced non-small-cell lung cancer: ESMO Clinical Practice Guideline for diagnosis, treatment and follow-up - Amsterdam UMC
  6. Carbon-Ion radiotherapy alone for inoperable locally advanced Non-Small cell lung cancer: A Japanese National registry study (J-CROS-LUNG) | Japanese Journal of Radiology
  7. Early and locally advanced non-small-cell lung cancer: ESMO Clinical Practice Guideline for diagnosis, treatment and follow-up - Amsterdam UMC
  8. Carbon-Ion radiotherapy alone for inoperable locally advanced Non-Small cell lung cancer: A Japanese National registry study (J-CROS-LUNG) | Japanese Journal of Radiology | Springer Nature Link
  9. PTCOG - Facilities in Operation (public)

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