A rapid, accessible real-time PCR approach to identify UBA1 somatic mutations in VEXAS syndrome - Report - MDSpire

A rapid, accessible real-time PCR approach to identify UBA1 somatic mutations in VEXAS syndrome

  • By

  • Luisa Agnello

  • Caterina Maria Gambino

  • Lidia La Barbera

  • Anna Masucci

  • Roberta Vassallo

  • Francesco Cacciabaudo

  • Mauro Midiri

  • Concetta Scazzone

  • Anna Maria Ciaccio

  • Giuliana Guggino

  • Marcello Ciaccio

  • May 28, 2026

  • 0 min

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Clinical Report: A Quick and Accessible Real-Time PCR Method for Detecting UBA1 Somatic Mutations in VEXAS Syndrome

Overview

This study validates a rapid allele-specific real-time PCR assay for detecting UBA1 mutations associated with VEXAS syndrome. The assay demonstrated high sensitivity and concordance with Sanger sequencing, enabling timely diagnosis.

Background

VEXAS syndrome is a severe autoinflammatory disease linked to somatic mutations in the UBA1 gene, primarily affecting older males. Early diagnosis is crucial due to the syndrome's high morbidity and mortality rates. Traditional sequencing methods may be limited in sensitivity and turnaround time, highlighting the need for more accessible diagnostic approaches.

Data Highlights

MethodResults
Real-time PCRIdentified UBA1 mutations in 5/6 (83.3%) suspected cases
Sanger SequencingConfirmed 100% concordance with PCR results

Key Findings

  • The allele-specific real-time PCR assay effectively detected UBA1 mutations in suspected VEXAS syndrome cases.
  • 83.3% of patients with high clinical suspicion tested positive for UBA1 mutations.
  • There was 100% concordance between real-time PCR results and Sanger sequencing.
  • This method provides a rapid and cost-effective alternative to traditional sequencing techniques.
  • Real-time PCR can detect low-level somatic mutations with high sensitivity.

Clinical Implications

The rapid allele-specific real-time PCR assay offers a practical solution for clinicians to confirm VEXAS syndrome in patients with high clinical suspicion. This method can facilitate timely diagnosis and management, potentially improving patient outcomes.

Conclusion

The validated real-time PCR assay represents a significant advancement in the diagnostic approach for VEXAS syndrome, enabling rapid and reliable detection of critical UBA1 mutations.

Related Resources & Content

  1. Clinical Rheumatology, 2025 -- Global Expert Panel Insights from a Cross-Sectional Study on VEXAS Syndrome
  2. Clinical Rheumatology, 2024 -- Review of Allogeneic Hematopoietic Stem Cell Transplantation Outcomes in 33 Patients with VEXAS Syndrome
  3. Frontiers in Immunology, 2026 -- VEXAS Syndrome for the laboratory physician: a case report
  4. New ACR Guidance, 2025 -- Diagnosis and Management of VEXAS Syndrome
  5. Acta Neuropathologica — Deficiency of UGP2 in the brain results in a profound epileptic encephalopathy, highlighting that bi-allelic mutations leading to isoform-specific start-loss in critical genes can result in genetic disorders.
  6. New ACR Guidance: Diagnosis and Management of VEXAS Syndrome
  7. Rapid Screening and Monitoring of UBA1 Mutations in VEXAS Syndrome - PubMed
  8. Efficacy and safety of azacitidine for VEXAS syndrome: a large-scale retrospective study from FRENVEX - PubMed

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