Immunoinformatics-driven design of a multi-epitope vaccine against Clostridium perfringens in yaks - Report - MDSpire

Immunoinformatics-driven design of a multi-epitope vaccine against Clostridium perfringens in yaks

  • By

  • Dan Wu

  • Runbo Luo

  • Kexin Li

  • Yulin Peng

  • Xiao Yue

  • Yurui Wang

  • Haoyu Fan

  • Yifang Wen

  • Yixin Huang

  • Sizhu Suolang

  • Suizhong Cao

  • June 29, 2026

  • 0 min

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Clinical Report: Development of a Multi-Epitope Vaccine for Clostridium perfringens in Yaks

Overview

This study presents the development of a novel multi-epitope vaccine candidate for Clostridium perfringens in yaks, utilizing immunoinformatics techniques. The vaccine demonstrated high antigenicity and structural stability.

Background

Clostridium perfringens is a significant pathogen causing enterotoxemia in yaks, leading to considerable economic losses in the Qinghai-Tibet Plateau. Traditional vaccines have shown limited efficacy and protective breadth.

Data Highlights

ParameterValue
VaxiJen score0.9092
Binding affinity with TLR2-1024.6 kcal/mol
Binding affinity with TLR4-1104.4 kcal/mol
Average RMSD TLR4 complex0.1971 ± 0.0377 nm
Average RMSD TLR2 complex0.2692 ± 0.0420 nm

Key Findings

  • Five core virulence proteins were identified from genomic data.
  • Ten cytotoxic T lymphocyte (CTL) epitopes, five helper T lymphocyte (HTL) epitopes, and five B-cell epitopes were predicted and selected.
  • The final multi-epitope vaccine construct consisted of 352 amino acids and included the adjuvant human β-defensin-3.
  • Molecular docking showed strong binding affinity with TLR2 and TLR4.
  • In silico cloning indicated potential for efficient expression in E. coli.

Clinical Implications

Further experimental validation is necessary to confirm the efficacy of this vaccine in vivo.

Conclusion

The study successfully designed a multi-epitope vaccine against C. perfringens in yaks.

Related Resources & Content

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  2. Frontiers in Immunology, 2026 -- Preclinical evaluation of a multi-epitope mRNA vaccine platform for broad and durable SARS-CoV-2 protection
  3. Frontiers in Immunology, 2026 -- Adjuvant-driven epitope hierarchy correlates with the protective efficacy of FimA vaccine against Klebsiella pneumoniae
  4. Enterotoxemias in Animals - Infectious Diseases - Merck Veterinary Manual
  5. Clostridial Vaccines for Animals - Infectious Diseases - MSD Veterinary Manual
  6. the analytical scientist — A Singular Approach to Combatting Infectious Disease
  7. Seroprevalence, isolation, comprehensive characterization, and pathogenicity of Clostridium perfringens strain from yak in Xizang, China
  8. Prevalence of Clostridium perfringens in sheep and goat populations across Asia: A systematic review and meta-analysis
  9. Enterotoxemias in Animals - Infectious Diseases - Merck Veterinary Manual
  10. Clostridial Vaccines for Animals - Infectious Diseases - MSD Veterinary Manual
  11. GoatVac C.D.-T for Animal Use - Drugs.com
  12. Frontiers | A lipid nanoparticle encapsulated CPA-CTD mRNA vaccine provides protection against Clostridium perfringens-driven diseases
  13. A pangenome-based strategy for designing a multi-epitope vaccine against non-toxin antigens of necrotic enteritis-associated Clostridium perfringens | Brazilian Journal of Microbiology | Springer Nature Link
  14. In-silico epitope-based vaccines design: progress, challenges and the road ahead - PubMed

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