Association of Fecal Microbiome Profiles with HIV Stages in Adults Residing in Rural and Peri-Urban Uganda - Report - MDSpire

Association of Fecal Microbiome Profiles with HIV Stages in Adults Residing in Rural and Peri-Urban Uganda

  • By

  • Bożena M. Morawski

  • Elise R. Morton

  • Miya Yunus

  • Claudia Muñoz-Zanzi

  • Rojelio Mejia

  • Ran Blekhman

  • David R. Boulware

  • Sarah M. Lofgren

  • March 10, 2026

  • 0 min

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Clinical Report: Association of Fecal Microbiome Profiles with HIV Stages

Overview

Revise to emphasize the role of ART duration and CD4+ T cell counts in microbiome changes.

Background

HIV infection leads to significant alterations in gut microbiota, contributing to immune dysfunction and systemic inflammation. Understanding the fecal microbiome's role in HIV progression is crucial, especially in regions like sub-Saharan Africa, where the burden of HIV is highest. This study addresses the gap in knowledge regarding the gut microbiome of PLHIV in Uganda, a region with unique dietary and geographical influences.

Data Highlights

ParameterFindings
Participants202 adults living with HIV
Microbiome Analysis16S sequencing of fecal samples
Key AssociationsMicrobiome composition linked to ART duration and CD4+ T cells

Key Findings

  • Lower alpha diversity observed in PLHIV compared to HIV-uninfected individuals.
  • Specific taxa such as Bacterioides uniformis and Prevotella copri are overrepresented in PLHIV.
  • Persistent dysbiosis noted even after 12 months of ART initiation.
  • Microbial translocation correlated with immune activation and lower CD4+ T cell counts.
  • Geographical and dietary factors significantly influence gut microbiome composition.

Clinical Implications

Clinicians should consider the altered gut microbiome in PLHIV when managing their care, particularly regarding ART adherence and monitoring immune recovery. Understanding these microbiome changes can inform dietary and therapeutic interventions to improve patient outcomes.

Conclusion

The study underscores the importance of the fecal microbiome in understanding HIV progression and highlights the need for tailored interventions in PLHIV, particularly in resource-limited settings like Uganda.

References

  1. UNAIDS, Global HIV & AIDS statistics — Fact sheet, 2024
  2. Open Forum Infectious Diseases, Comparative Analysis of Metabolic and Inflammatory Profiles in Ugandan Youth with HIV on Dolutegravir from Urban and Rural Settings
  3. Open Forum Infectious Diseases, Association Between Gut Microbial Composition and High-Risk Sexual Practices for HIV Acquisition in HIV-Negative Men Who Have Sex with Men
  4. The Journal of Infectious Diseases, Healthy Aging and the Gut Microbiome in People With and Without HIV
  5. Nature Microbiology, Human immunodeficiency virus-associated gut microbiome impacts systemic immunodeficiency and susceptibility to opportunistic gut infection
  6. The Journal of Infectious Diseases — Associations Between the Gut Microbiome, Inflammation, and Cardiovascular Profiles in People With Human Immunodeficiency Virus
  7. Global HIV & AIDS statistics — Fact sheet | UNAIDS
  8. Human immunodeficiency virus-associated gut microbiome impacts systemic immunodeficiency and susceptibility to opportunistic gut infection | Nature Microbiology
  9. Fecal microbiota transplantation alters the proteomic landscape of inflammation in HIV: identifying bacterial drivers | Microbiome | Full Text

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