Multi-modal dataset creation for federated learning with DICOM-structured reports - Scorecard - MDSpire

Multi-modal dataset creation for federated learning with DICOM-structured reports

  • By

  • Malte Tölle

  • Lukas Burger

  • Halvar Kelm

  • Florian André

  • Peter Bannas

  • Gerhard Diller

  • Norbert Frey

  • Philipp Garthe

  • Stefan Groß

  • Anja Hennemuth

  • Lars Kaderali

  • Nina Krüger

  • Andreas Leha

  • Simon Martin

  • Alexander Meyer

  • Eike Nagel

  • Stefan Orwat

  • Clemens Scherer

  • Moritz Seiffert

  • Jan Moritz Seliger

  • Stefan Simm

  • Tim Friede

  • Tim Seidler

  • Sandy Engelhardt

  • February 3, 2025

  • 0 min

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Clinical Scorecard: Creation of Multi-Modal Datasets for Federated Learning Utilizing DICOM-Formatted Reports

At a Glance

CategoryDetail
ConditionMulti-modal medical data integration for federated learning
Key MechanismsUse of DICOM standard structured reports for harmonized multi-modal data representation and federated cohort selection
Target PopulationMedical institutions and researchers managing multi-modal imaging, waveform, and metadata datasets
Care SettingMulti-center clinical research and federated learning environments

Key Highlights

  • Leveraging DICOM standards enables harmonized storage and querying of multi-modal medical data including images, waveforms, segmentations, and metadata.
  • An intuitive, non-programming graphical dashboard facilitates multi-center cohort creation and iterative filtering of DICOM data in PACS.
  • Publicly available Python scripts and SR templates support conversion and creation of DICOM structured reports for deep learning pipelines.

Guideline-Based Recommendations

Diagnosis

  • Utilize DICOM structured reports to standardize multi-modal medical data for consistent cohort identification across centers.

Management

  • Convert all local multi-modal data into DICOM format and upload into research PACS to enable federated data harmonization.
  • Implement federated learning by locally training models on harmonized DICOM data and aggregating model weights centrally.

Monitoring & Follow-up

  • Use the graphical dashboard to iteratively filter and refine cohorts, ensuring data completeness and modality presence.
  • Apply standardized queries across locations to maintain consistency in cohort selection.

Risks

  • Non-adherence to standardized DICOM templates may impair data harmonization and federated learning efficacy.
  • Privacy regulations restrict centralized data sharing; federated learning and local data processing mitigate this risk.

Patient & Prescribing Data

Patients with multi-modal imaging and waveform data distributed across multiple clinical centers

Federated learning on harmonized DICOM datasets enables development of robust predictive models without compromising patient privacy.

Clinical Best Practices

  • Adopt DICOM structured reports as the single data format for multi-modal medical data to simplify interoperability and federated cohort selection.
  • Deploy graphical filtering dashboards that allow users without programming expertise to create and refine multi-center cohorts.
  • Ensure strict adherence to DICOM templates to maintain data validity and enable effective federated learning workflows.
  • Leverage DICOM’s inherent matching capabilities to link images, waveforms, and metadata seamlessly within PACS.

References

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