Identification and validation of an explainable prediction model of favorable outcome under integrative medicine treatment exposure in DKD adult patients: a retrospective cohort study - Summary - MDSpire
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Identification and validation of an explainable prediction model of favorable outcome under integrative medicine treatment exposure in DKD adult patients: a retrospective cohort study
To develop and validate an explainable model for predicting likelihood of favorable outcome under integrative medicine treatment (IMT) exposure in adult diabetic kidney disease (DKD) patients.
Approach:
Cohort Analysis: A retrospective cohort of 7,400 DKD patients from 2010 to 2018 was analyzed, with 3,900 cases divided into training and test sets, and 3,500 cases for temporal validation.
Feature Selection and Model Development: Feature selection was performed using the Boruta algorithm, followed by LASSO regression, Random Forest, and XGBoost-SHAP analysis. Predictive models were evaluated based on AUC and other performance metrics.
Web Application Deployment: The optimal XGBoost classifier was deployed as an interactive web application using the R Shiny framework.
Key Findings:
XGBoost achieved the best performance with AUC = 0.783 in training, 0.715 in test, and 0.762 in validation sets.
Ten key variables were identified: creatinine, uric acid, age, red blood cell count, urea, glucose, platelet count, calcium, white blood cell count, and sodium.
The web application allows for real-time prediction of favorable outcomes under IMT.
Interpretation:
The model effectively predicts likelihood of favorable outcomes under IMT exposure in DKD, aiding personalized treatment.
Limitations:
The study is retrospective and may be subject to biases inherent in such designs.
The model's applicability may be limited to the specific population studied.
Conclusion:
The developed model provides a tool for predicting outcomes in DKD patients receiving IMT, facilitating personalized treatment strategies.