The Majority of Bacillus subtilis Strains Isolated From Blood Cultures Were Derived From Traditional Japanese Fermented Soybeans Natto: A Single-center Retrospective Study - Summary - MDSpire

The Majority of Bacillus subtilis Strains Isolated From Blood Cultures Were Derived From Traditional Japanese Fermented Soybeans Natto: A Single-center Retrospective Study

  • By

  • Ryuichi Minoda Sada

  • Go Yamamoto

  • Shigeto Hamaguchi

  • Eisuke Kuroda

  • Akiko Okura

  • Manke Cai

  • Kotone Nakanishi

  • Noriyuki Abe

  • Shungo Yamamoto

  • Satoshi Kutsuna

  • September 23, 2025

  • 0 min

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Objective:

To assess the prevalence and clinical impact, including morbidity and mortality, of Bacillus subtilis var. natto in cases of B. subtilis bacteremia.

Key Findings:
  • Out of 4634 positive blood cultures, 70 (1.5%) were identified as B. subtilis, with 69 (99%) classified as B. subtilis var. natto. The total number of patients analyzed was 4634.
  • 25 cases (36%) were confirmed as true bacteremia.
  • Primary diagnoses included intra-abdominal infections, pneumonia, and urinary tract infections.
  • The median patient age was 79 years, with a 16% 30-day mortality rate.
Interpretation:

B. subtilis var. natto, often considered a harmless probiotic, can unexpectedly cause significant bacteremia, particularly in elderly or immunocompromised patients.

Limitations:
  • The study is retrospective and conducted at a single center, which may limit generalizability.
  • The reliance on genetic testing for accurate identification of B. subtilis var. natto may not be feasible in all clinical settings, potentially leading to underdiagnosis.
Conclusion:

Clinicians should recognize the potential severity of B. subtilis var. natto bacteremia and not dismiss it as harmless, especially in vulnerable populations.

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