Interpretable machine learning-driven multi-omics risk stratification and drug repurposing nominates Treg/Th17 with gluconeogenesis/lactylation integration as a prognostic and druggable biomarker for glioblastoma patients - Summary - MDSpire

Interpretable machine learning-driven multi-omics risk stratification and drug repurposing nominates Treg/Th17 with gluconeogenesis/lactylation integration as a prognostic and druggable biomarker for glioblastoma patients

  • By

  • Siqi Xie

  • Weiming Chen

  • Bing Zhang

  • Shangeng Weng

  • July 14, 2026

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Objective:

To gain insights into the mechanisms of Treg/Th17 balance and gluconeogenesis/lactylation in glioblastoma (GBM) progression.

Approach:
  • Data Integration: Integrated GBM cerebral public bulk profiles from GEO database with gluconeogenesis and lactylation gene lists to identify shared DEGs.
  • Risk Stratification Model: Developed a TGL-associated risk stratification model using Lasso-cox regression analysis in TCGA-GBM training cohort and validated in GEO dataset.
  • Heterogeneity Assessment: Assessed immune and intratumoral heterogeneity between high-risk and low-risk groups.
  • Hub Gene Identification: Utilized SHAP for interpretability of Lasso-cox regression and identified a TGL-associated hub gene.
  • Therapeutic Strategy: Performed ridge regression and molecular docking to identify optimal therapeutic strategies targeting the hub gene.
Key Findings:
  • Integrated TGL can guide risk stratification and prognostic model construction for GBM patients.
  • ODC1 is identified as an up-regulated TGL-related regulator involved in GBM pathogenesis.
  • THZ-2-102–1 is proposed as a potential drug targeting ODC1 for GBM treatment.
Interpretation:

The study integrates TGL-associated gene signatures in GBM patient risk stratification and therapeutic frameworks using machine learning and multi-omics.

Conclusion:

This study integrates TGL-associated gene signatures in GBM patient risk stratification and therapeutic frameworks.

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