IL21 is predominantly produced by a CXCL13 associated CD4+ T cell subset and shapes the immune microenvironment in colorectal cancer - Summary - MDSpire
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IL21 is predominantly produced by a CXCL13 associated CD4+ T cell subset and shapes the immune microenvironment in colorectal cancer
To investigate the expression pattern, cellular source, regulatory program, and potential biological role of IL21 in colorectal cancer.
Approach:
Single-cell RNA sequencing analysis: Analyzed tumor-infiltrating T cells from public datasets to characterize IL21 expression patterns.
External validation: Used a single-cell cohort of colorectal cancer cells treated with anti-PD-1 neoadjuvant therapy.
Multiplex immunofluorescence staining: Performed on colorectal cancer tissue microarrays to validate spatial distribution and cellular origin of IL21.
Correlation analysis: Assessed the relationship between IL21 and immune-related cell subsets.
SCENIC analysis: Identified candidate transcription factors associated with CXCL13-associated CD4+ T cell subsets.
In vitro culture and RNA sequencing: Cultured tumor tissues from an AOM/DSS-induced mouse colorectal cancer model to explore IL21-induced transcriptional changes.
Key Findings:
IL21 expression was restricted to a limited fraction of tumor-infiltrating T cells, predominantly in CXCL13+CD4+ T cell populations.
IL21R was more broadly expressed across T cell populations.
Tissue-level multiplex immunofluorescence confirmed increased IL21 and IL21+CD4+ T cells in tumor tissues compared to adjacent normal tissues.
Correlation analysis indicated a positive association between IL21 expression and various CD4+ T cell populations.
SCENIC analysis identified STAT1, IRF9, IRF7, TBX21, and IRF4 as candidate key transcription factors in the CD4_C09-CXCL13 subset.