Machine learning prediction of hypertension integrating polygenic risk scores in inner Eurasian populations - Summary - MDSpire

Machine learning prediction of hypertension integrating polygenic risk scores in inner Eurasian populations

  • By

  • Vera Tsvetkova

  • Aleksandra Denisova

  • Saleem Mansour

  • Layal Shaheen

  • Iskandar Hweijeh

  • Leushin Artem

  • Travin Grigorii

  • Dilya Turkmenova

  • Liya Valieva

  • Anna Kim

  • Dmitrii Kharitonov

  • Anna Ilinskaya

  • Maria Poptsova

  • Valery Ilinsky

  • Alexander Rakitko

  • July 8, 2026

  • 0 min

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Objective:

To evaluate the performance of polygenic risk scores (PRS) for hypertension in Russia and to develop predictive models integrating PRS and questionnaire-based risk factors for disease risk assessment.

Approach:
  • Cohort Analysis: Analyzed a cohort of 175,704 individuals from multiethnic inner Eurasian populations.
  • PRS Evaluation: Evaluated published PRS for systolic blood pressure, diastolic blood pressure, and pulse pressure for association with hypertension across different ancestry groups.
  • Predictive Modeling: Developed predictive models using multiple machine learning tools, including neural networks, integrating PRS and questionnaire-derived risk factors.
Key Findings:
  • PRSs for systolic and diastolic blood pressure showed marked differences between the top and bottom deciles of the PRS distribution, with odds ratios of 6.20 (95% CI: 5.22–7.36) and 6.71 (95% CI: 5.58–8.06), respectively.
  • The PRS for pulse pressure was associated with hypertension, with an odds ratio of 3.71 (95% CI: 3.16–4.35).
  • All evaluated PRSs were consistently associated with hypertension across various ancestry groups in Russia.
  • A neural network model integrating PRSs with questionnaire-based risk factors achieved a test ROC-AUC of 0.8245 (95% CI: 0.8114–0.8362).
Interpretation:

The study demonstrates that PRSs for blood pressure traits retain substantial predictive value across diverse inner Eurasian populations.

Limitations:
  • The study may not fully represent all ethnic groups within the inner Eurasian populations due to the diversity of the region.
  • Potential biases in self-reported medical history could affect the accuracy of hypertension classification.
Conclusion:

The systolic blood pressure PRS showed robust predictive value across diverse populations.

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