Gut microbiota induces immune-related alterations in gene expression, RNA methylation, and metabolism in glioblastoma revealed by single-cell and spatial multi-omics
By
Mingcong Chen
Xiang Wang
Gang Peng
Lihe Jiang
Hao Liang
Ping Cui
July 15, 2026
Objective: To investigate how antibiotic-induced gut microbiota disruption impacts glioma progression using a multi-omics approach.
Approach: Study Design: Utilized single-cell transcriptomics, spatial transcriptomics, metagenomics, metabolomics, and m6A-seq in a mouse model.Gene Expression Analysis: Performed RNA sequencing to identify differentially expressed genes in glioma-bearing mice treated with antibiotics.Metabolomic Profiling: Analyzed metabolite levels in gliomas to link gut-derived changes to epigenetic regulation.Single-Cell RNA Sequencing: Examined cellular composition and intercellular communication in gliomas.Key Findings: ABX-treated mice showed reduced expression of Epha6 and increased expression of Tead1, both associated with glioma progression. Metabolomic profiling revealed decreased methionine levels in gliomas from ABX-treated mice. Single-cell RNA sequencing indicated an increased proportion of AC-like cells and disrupted intercellular communication. Interpretation: The study investigates the relationship between gut microbiota, immune signaling, and epigenetic modifications in glioma biology.
Limitations: The study was conducted in a mouse model, which may not fully replicate human glioma biology. The precise mechanisms linking gut microbiota changes to glioma progression require further investigation. Conclusion: The findings provide insights into the role of the gut-brain axis in glioma regulation.