Gut microbiota induces immune-related alterations in gene expression, RNA methylation, and metabolism in glioblastoma revealed by single-cell and spatial multi-omics - Summary - MDSpire

Gut microbiota induces immune-related alterations in gene expression, RNA methylation, and metabolism in glioblastoma revealed by single-cell and spatial multi-omics

  • By

  • Mingcong Chen

  • Xiang Wang

  • Gang Peng

  • Lihe Jiang

  • Hao Liang

  • Ping Cui

  • July 15, 2026

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Objective:

To investigate how antibiotic-induced gut microbiota disruption impacts glioma progression using a multi-omics approach.

Approach:
  • Study Design: Utilized single-cell transcriptomics, spatial transcriptomics, metagenomics, metabolomics, and m6A-seq in a mouse model.
  • Gene Expression Analysis: Performed RNA sequencing to identify differentially expressed genes in glioma-bearing mice treated with antibiotics.
  • Metabolomic Profiling: Analyzed metabolite levels in gliomas to link gut-derived changes to epigenetic regulation.
  • Single-Cell RNA Sequencing: Examined cellular composition and intercellular communication in gliomas.
Key Findings:
  • ABX-treated mice showed reduced expression of Epha6 and increased expression of Tead1, both associated with glioma progression.
  • Metabolomic profiling revealed decreased methionine levels in gliomas from ABX-treated mice.
  • Single-cell RNA sequencing indicated an increased proportion of AC-like cells and disrupted intercellular communication.
Interpretation:

The study investigates the relationship between gut microbiota, immune signaling, and epigenetic modifications in glioma biology.

Limitations:
  • The study was conducted in a mouse model, which may not fully replicate human glioma biology.
  • The precise mechanisms linking gut microbiota changes to glioma progression require further investigation.
Conclusion:

The findings provide insights into the role of the gut-brain axis in glioma regulation.

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